MGT::KmerCounterLadder Member List

This is the complete list of members for MGT::KmerCounterLadder, including all inherited members.
counts(IterVal valObs, IterVal valExp, IterInd ind, IterInd sizes)MGT::KmerCounterLadder
doCNuc(CNuc cnuc)MGT::KmerCounterLadder [inline]
KmerCounterLadder(int kmerLen, const AbcConvCharToInt *pAbcConv=0, RC_POLICY revCompPolicy=RC_DIRECT)MGT::KmerCounterLadder
m_countersMGT::KmerCounterLadder [protected]
m_revCompPolicyMGT::KmerCounterLadder [protected]
m_topBotDepMGT::KmerCounterLadder [protected]
m_topOneDepMGT::KmerCounterLadder [protected]
makeTopDownKmerInd()MGT::KmerCounterLadder [protected]
maxNumKmers(ULong seqLen, IterInd sizes) const MGT::KmerCounterLadder
numKmers(IterInd sizes) const MGT::KmerCounterLadder
process(IterCNuc first, IterCNuc last)MGT::KmerCounterLadder [inline]
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