MGT::GFF::GFF3Record Class Reference

Inheritance diagram for MGT::GFF::GFF3Record:

List of all members.

Public Member Functions
def	__init__
def	fromSeqFeat

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Detailed Description

Represents one record (line) in GFF3 file.

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Constructor & Destructor Documentation

def MGT::GFF::GFF3Record::__init__	(		self,
			seqid = '.',
			source = '.',
			type = '.',
			start = 0,
			end = 1,
			score = '.',
			strand = '.',
			phase = '.',
			attribs = None,
			kw
	)

Constructor.
Attributes can be passed as GFF3Attributes object through attribs argument, or
as additional keyword arguments, or both.
@param start Start of feature (zero-based, will be converted to GFF unit-based on output)
@end end of feature (zero-based, will be converted to GFF unit-based on output)

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Member Function Documentation

def MGT::GFF::GFF3Record::fromSeqFeat	(		self,
			feat
	)

Pull data from Bio.SeqFeature instance

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The documentation for this class was generated from the following file:

• mgtaxa/MGT/GFF.py