MGT::TaxaIO::NodeStorageNcbiDump Class Reference

List of all members.

Public Member Functions
def	__init__

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Detailed Description

Loads tree nodes from NCBI flat dump file(s).
This is 3x slower than loading through NodeStoragePickle representation.

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Constructor & Destructor Documentation

def MGT::TaxaIO::NodeStorageNcbiDump::__init__	(		self,
			ncbiDumpFile = None,
			ncbiNamesDumpFile = None,
			allNames = False
	)

Load taxonomy tree nodes from NCBI dump files.
@param ncbiDumpFile nodes.dump
@param ncbiNamesDumpFile names.dump
@param allNames whether to load all names to node attribute 'names'

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The documentation for this class was generated from the following file:

• mgtaxa/MGT/TaxaIO.py